Publications

1.Paper

2003
1. Namiki,N., Antonio,B.A., Idonuma.A.,Masukawa,M., Shibata,M., Ito,Y.,Yamamoto,M., Ohta,I., Mukai,Y., Naitoh,S., Katayose,Y., Matsumoto,T.,Nagamura,Y. & Sasaki,T. (2003) Rice Genome Annotation Pipeline System in RGP. Rice Genetics Newsletter 20: 119-121
2005
2. Ito, Y(I)., Arikawa, K, Antonio, B.A., Ohta, I., Naito, S., Mukai, Y., Shimano, A.,Masukawa, M., Shibata, M.,Yamamoto, M., Ito, Y(K)., Yokoyama, J.,Sakai, Y., Sakata, K., Nagamura, Y., Namiki, N., Matsumoto, T., Higo, K. and Sasaki, T., Rice Annotation Database (RAD): A Contig-oriented Database for Map-based Rice Genomics., Nucleic Acids Research., 33, D651-D655

2.Poster

2002

1. Ito, Y(I), Ohta, I., Mukai, Y., Naito, S., Antonio, B. A., Idonuma, A., Masukawa, M., Shibata, M., Yamamoto, M., Arikawa, K., Sakai, Y., Yokoyama, J., Sakata, K., Namiki, N., Matsumoto, T. and Sasaki, T.(2005), "Rice genome Annotation Database (RAD)"., 24th Annual Meeting of the Molecular Biology Society of Japan., Dec 11-14 2002.

2. Ito, Y(I), Ohta, I., Mukai, Y., Naito, S., Antonio, B. A., Shimano, A., Masukawa, M., Shibata, M., Yamamoto, M., Arikawa, K., Sakai, Y., Makino. K., Sakata, K., Namiki, N., Matsumoto, T. and Sasaki, T. "RAD: Rice Annotation Database"., 13th Genome Informatics Workshop 2002., Dec 16-18 2002.
2003
3. Ito, Y(I)., Ohta, I., Mukai.Y, Naito,S., Antonio, B. A., Shimano. A, Masukawa, M., Shibata, M., Yamamoto, M., Arikawa, K., Sakai, Y., Makino.K, Sakata, K., Namiki, N., Matsumoto, T. and Sasaki, T. "Rice Annotation Database (RAD): A contig-oriented database for high-quality manual annotation at RGP"., International Rice Genome workshop 2003., Feb5-7 2003.

4. Yamamoto, M., Idonuma, A., Masukawa, M., Antonio, B. A., Shibata, M., Ito, Y(K), Namiki, N., Matsumoto, T. and Sasaki, T. ( NIAS/STAFF., RGP )., "Genomic structure and characteristics of rice chromosome 7"., 103th Annual meeting of the Japanese Society of Breeding., Apr 1-3 2003. (山本麻裕・井戸沼淳子・増川正敏・B. A. Antonio・柴田未知恵・伊藤裕一・並木信和・松本隆・佐々木卓治（生物研/STAFF・イネゲノム研究チーム）イネ第7染色体のゲノム構造とその特提,第103回日本育種学会)

5. Ito, Y(I)., Ohta, I., Mukai. Y, Naito, S., Antonio, B. A., Shimano. A, Masukawa, M., Shibata, M., Yamamoto., M., Arikawa, K., Sakai, Y., Makino, K, Sakata, K., Namiki, N., Matsumoto, T. and Sasaki, T., "Rice Annotation Database (RAD) : A contig-oriented database for map-based informatics"., The 7th International Congress of Plant Molecular Biology, June 23-28 2003.

6. Shibata, M., Shimano, A, Masukawa, M., Antonio, B. A., Ito, Y(K)., Ito, Y(I)., Yamamoto, M., Namiki, N., Matsumoto and T., Sasaki, T., " Progress of Annotation to rice chromosome 7"., 104th Annual meeting of the Japanese Society of Breeding., Sep 18-21 2003. (柴田未知恵・島野淳子・増川正敏・B.A. Antonio・伊藤幸代・伊藤裕一・山本麻裕・並木信和・松本隆・佐々木卓治（生物研/STAFF・イネゲノム研究チーム）イネ第7染色体のアノテーション進捗状況,第104回日本育種学会)

7. Yamamoto, M., Shimano, A., M. Masatoshi, Antonio, B. A., Shibata, M., Ito, Y(K)., Ito, Y(I)., Namiki, N., Matsumoto, T. and Sasaki, T., "Progress of Rice Genome Annotation"., 26th Annual Meeting of the Molecular Biology Society of Japan., Dec 10-13 2003. (山本麻裕・島野淳子・増川正敏・Baltazar A. Antonio・柴田未知恵・伊藤幸代・伊藤裕一・並木信和・松本隆・佐々木卓治（生物研/STAFF・イネゲノム研究チーム）イネゲノムのアノテーション進捗状況, 第26回日本分子生物学会年会)

8. Ito, Y(I)., Ohta, I., Mukai. Y, Antonio, B. A., Shibata, M., Yamamoto, M., Ito, Y(K), Sakata, K., Namiki, N., Matsumoto, T. and Sasaki, T., "Current status of Rice Annotation Database (RAD)"., 14th Genome Informatics Workshop., Dec 14-17 2003.
2004
9. Ito, Y(I)., Antonio, B. A., Mukai, Y., Shibata,M., Ito, Y(K), Yamamoto, M., Tsugane, H. M., Sakata, K., Namiki, N., Matsumoto, T. and Sasaki, T., "A contig-oriented database for rice genome informatics : Rice Annotation Database (RAD)"., International Rice Genome workshop 2004., Feb 4-6 2004.

10. Ito, Y(K)., Shibata, M., Yamamoto, M., Tsugane, H. M., Ito, Y(I)., Mukai, Y., Namiki, N., Matsumoto and T., Sasaki, T., "Progress of rice chromosome 8 annotation"., 105 th Annual meeting of the Japanese Society of Breeding., Mar 29-31 2004. (伊藤幸代・柴田未知恵・山本麻裕・栂根美佳・伊藤裕一・向井喜之・並木信和・松本隆・佐々木卓治 (生物研/STAFF・イネゲノム研究チーム) イネ第8染色体のアノテーション進捗状況,第105回日本育種学会 )

11. Namiki, N., Shibata, M., Yamamoto, M., Ito, Y(K)., Tsugane, H. M., Hosokawa, S.,Hamada, M., Negishi, M., Ito, Y(I)., Mukai, Y., Matsumoto, T. and Sasaki, T., "Progress of rice chromosome 2 and 9"., 106 th Annual meeting of the Japanese Society of Breeding., Sep 20-23 2004. (並木信和・柴田未知恵・山本麻裕・伊藤幸代・栂根美佳・細川聡美・濱田昌雄・根岸真奈美・伊藤裕一・向井義之・松本隆・佐々木卓治（生物研/STAFF／イネゲノム研究チーム）イネ第２及び第９染色体のアノテーション進捗状況, 第106回日本育種学会 )

12. Namiki, N., Shibata, M., Yamamoto, M., Ito, Y(K)., Tsugane, H. M., Hosokawa, S.,Hamada, M., Negishi, M., Ito, Y(I)., Mukai, Y., Matsumoto, T. and Sasaki, T., "Progress of rice genome annotation"., 27 th Annual Meeting of the Molecular Biology Society of Japan., Dec 8-11 2004. (並木信和・柴田未知恵・山本麻裕・伊藤幸代・栂根美佳・細川聡美・濱田昌雄・根岸真奈美・伊藤裕一・向井義之・松本隆・佐々木卓治（生物研/STAFF／イネゲノム研究チーム）� イネゲノムのアノテーション進捗状況, 第27回日本分子生物学会年会 )